ImageXd

The successor for image and image3d (more info coming soon …)

New:
* Calculation of orientation tensors
* Analysis of tensor fields (FA, RA, Mean, …)
* For a possible visualization of your tensor data, I recommend the following paper: Leemans (2010) Visualization of Diffusion MRI Data

Major changes:
* namespace image -> scalar for image3d
* scalar.rgb & scalar.rgba -> vector.rgb & vector.rgba

Version 0.12.22

This program is owned by Heiko Stark. It can be used free of charge for non-commercial use. For the common citations in publications please use the following entry “ImageXd software (Heiko Stark, Jena, Germany, URL: https://starkrats.de).


An installer for Windows and Linux can be found here: Software

imagexd 64bit (Windows & Wine/Darwine)
imagexd 32bit (Windows, ReactOS & Wine/Darwine)
imagexd 32bit (Windows CE)
imagexd arm (Windows CE)

imagexd 64bit (MacOS X & Darling)
imagexd 32bit (MacOS X & Darling)

imagexd 64bit (Linux)
imagexd 32bit (Linux)

imagexd 64bit (FreeBSD)
imagexd 32bit (FreeBSD)

imagexd 64bit (Solaris)
imagexd 32bit (Solaris)

Note: Intel 32bit runs also on 64bit systems, but only with 4GB memory!

//!imagexd
// This is a comment for the imagexd macro - you can use this macro like a programing language
// For more infos, please see https://stark-jena.de | imagexd
// Copyright (c) 2017 by Heiko Stark

// scalar.use default
scalar.load big.nii
new := scalar.substack <10,10,10> <20,20,20>
scalar.use new
scalar.save small.nii.gz

//!imagexd
// This is a comment for the image3d macro - you can use this macro like a programing language
// For more infos, please see https://stark-jena.de | imagexd
// Copyright (c) 2017 by Heiko Stark

io.files *.nii
io.files *.nii.gz
io.files *.hdr
for io.files.length // runs for every file from list io.files
begin
     scalar.load io.files.getfile // load a file from list io.files
     
     newfile := io.files.getname . txt 
     scalar.info io.files.getfile newfile
     
     newfile := io.files.getname -h. ppm 
     scalar.histogram newfile
     //scalar.analysis newfile
     
     scalar.setrange
     scalar.setcrop
     
     newfile := io.files.getname -o. ppm
     scalar.gradient newfile
     
     new // clean memory
     io.files.next // go to next file from list io.files
end


see also image and image3d

Used for the ‘KIP.FasciaRG‘ project.


And used for these investigations:

Dickinson E, Stark H, Kupczik K. (in press). Non-destructive determination of muscle architectural variables through the use of DiceCT. The Anatomical Record. DOI:10.1002/ar.23716 / ISSN:1932-8494


If you want to send me a bug report or have some suggestions about what future versions of ‘image3d’ should support you can contact me either by email (bugs[@]starkrats[dot]de).